Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ZNF253O75346 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.01□□□□□ -0.49
ZNF253O75346 AL591424.1-201ENST00000442569 1213 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.01□□□□□ -0.49
ZNF253O75346 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
ZNF253O75346 KRT8P23-201ENST00000560090 1207 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 AL135744.1-201ENST00000565098 629 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF253O75346 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 AC140479.7-201ENST00000636301 2332 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 AL356585.2-201ENST00000625078 2396 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 HLA-A-201ENST00000376802 1334 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 MBLAC2-202ENST00000514906 1936 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 AC018892.3-201ENST00000623986 2499 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ZNF253O75346 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 COL6A4P2-202ENST00000504443 2753 ntBASIC12.01□□□□□ -0.49
ZNF253O75346 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 DGCR9-201ENST00000609630 2415 ntBASIC12□□□□□ -0.49
ZNF253O75346 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 MIR346-201ENST00000362234 95 ntBASIC12□□□□□ -0.49
ZNF253O75346 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12□□□□□ -0.49
ZNF253O75346 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 TFAMP1-201ENST00000412727 736 ntBASIC12□□□□□ -0.49
ZNF253O75346 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12□□□□□ -0.49
ZNF253O75346 KRT18P2-201ENST00000447938 1258 ntBASIC12□□□□□ -0.49
ZNF253O75346 RNA5SP416-201ENST00000516838 111 ntBASIC12□□□□□ -0.49
ZNF253O75346 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12□□□□□ -0.49
ZNF253O75346 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12□□□□□ -0.49
ZNF253O75346 TCAF1P1-201ENST00000414990 2232 ntBASIC12□□□□□ -0.49
ZNF253O75346 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 AL136982.4-201ENST00000437689 1740 ntBASIC12□□□□□ -0.49
ZNF253O75346 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms