Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ACTN4O43707 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
ACTN4O43707 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
ACTN4O43707 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTN4O43707 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ACTN4O43707 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTN4O43707 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.16■□□□□ 0.34
ACTN4O43707 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.16■□□□□ 0.34
ACTN4O43707 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.16■□□□□ 0.34
ACTN4O43707 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTN4O43707 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.16■□□□□ 0.34
ACTN4O43707 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.16■□□□□ 0.34
ACTN4O43707 RARRES2P5-201ENST00000564013 466 ntBASIC17.16■□□□□ 0.34
ACTN4O43707 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.16■□□□□ 0.34
ACTN4O43707 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.16■□□□□ 0.34
ACTN4O43707 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ACTN4O43707 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ACTN4O43707 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTN4O43707 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTN4O43707 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTN4O43707 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ACTN4O43707 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTN4O43707 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ACTN4O43707 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.15■□□□□ 0.34
ACTN4O43707 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.15■□□□□ 0.34
ACTN4O43707 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTN4O43707 AL353779.1-201ENST00000434793 351 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 FAM86LP-201ENST00000478302 853 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 AC026410.3-201ENST00000514280 936 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 AC023310.3-201ENST00000557027 670 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 AC100756.1-201ENST00000562736 682 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.15■□□□□ 0.34
ACTN4O43707 AC138749.3-201ENST00000567691 622 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 AC107373.2-201ENST00000607735 490 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 AC116165.1-201ENST00000611806 668 ntBASIC17.15■□□□□ 0.34
ACTN4O43707 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.15■□□□□ 0.34
ACTN4O43707 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
ACTN4O43707 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTN4O43707 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTN4O43707 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
ACTN4O43707 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
ACTN4O43707 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ACTN4O43707 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.14■□□□□ 0.33
ACTN4O43707 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ACTN4O43707 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ACTN4O43707 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTN4O43707 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.14■□□□□ 0.33
ACTN4O43707 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.14■□□□□ 0.33
ACTN4O43707 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTN4O43707 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.14■□□□□ 0.33
ACTN4O43707 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms