Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.93□□□□□ -0.02
HDAC3O15379 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 KRT18P64-201ENST00000434946 1219 ntBASIC14.93□□□□□ -0.02
HDAC3O15379 MKNK2P1-201ENST00000437526 628 ntBASIC14.93□□□□□ -0.02
HDAC3O15379 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HDAC3O15379 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.93□□□□□ -0.02
HDAC3O15379 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.93□□□□□ -0.02
HDAC3O15379 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
HDAC3O15379 AC007967.4-201ENST00000614700 386 ntBASIC14.93□□□□□ -0.02
HDAC3O15379 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 LILRP1-201ENST00000444199 1370 ntBASIC14.93□□□□□ -0.02
HDAC3O15379 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.93□□□□□ -0.02
HDAC3O15379 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HDAC3O15379 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 AC005237.2-201ENST00000434368 219 ntBASIC14.92□□□□□ -0.02
HDAC3O15379 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 AC040169.1-201ENST00000565382 521 ntBASIC14.92□□□□□ -0.02
HDAC3O15379 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.92□□□□□ -0.02
HDAC3O15379 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 MIR6069-201ENST00000620069 79 ntBASIC14.92□□□□□ -0.02
HDAC3O15379 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HDAC3O15379 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 AC010327.5-201ENST00000586923 3061 ntBASIC14.92□□□□□ -0.02
HDAC3O15379 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HDAC3O15379 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HDAC3O15379 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HDAC3O15379 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HDAC3O15379 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HDAC3O15379 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.91□□□□□ -0.02
HDAC3O15379 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HDAC3O15379 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.91□□□□□ -0.02
HDAC3O15379 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.91□□□□□ -0.02
HDAC3O15379 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.91□□□□□ -0.02
HDAC3O15379 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HDAC3O15379 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HDAC3O15379 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.91□□□□□ -0.02
HDAC3O15379 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.91□□□□□ -0.02
HDAC3O15379 TPT1P11-201ENST00000458482 498 ntBASIC14.91□□□□□ -0.02
HDAC3O15379 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.91□□□□□ -0.02
HDAC3O15379 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.91□□□□□ -0.02
HDAC3O15379 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.91□□□□□ -0.02
HDAC3O15379 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.91□□□□□ -0.02
HDAC3O15379 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDAC3O15379 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms