Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 AC055811.4-201ENST00000624039 1754 ntBASIC15.29■□□□□ 0.04
MID1O15344 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
MID1O15344 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.28■□□□□ 0.04
MID1O15344 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MID1O15344 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 POM121L8P-201ENST00000417732 1281 ntBASIC15.28■□□□□ 0.04
MID1O15344 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.28■□□□□ 0.04
MID1O15344 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 POM121L9P-203ENST00000441984 1285 ntBASIC15.28■□□□□ 0.04
MID1O15344 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 C2orf69P2-201ENST00000562032 1123 ntBASIC15.28■□□□□ 0.04
MID1O15344 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.28■□□□□ 0.04
MID1O15344 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.28■□□□□ 0.04
MID1O15344 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.28■□□□□ 0.04
MID1O15344 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MID1O15344 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
MID1O15344 AL133338.1-201ENST00000565695 1517 ntBASIC15.27■□□□□ 0.04
MID1O15344 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 AL157414.3-201ENST00000624276 1954 ntBASIC15.27■□□□□ 0.04
MID1O15344 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MID1O15344 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MID1O15344 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 MIR1247-201ENST00000408206 136 ntBASIC15.27■□□□□ 0.04
MID1O15344 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.27■□□□□ 0.04
MID1O15344 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MID1O15344 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.27■□□□□ 0.04
MID1O15344 AC104306.2-201ENST00000451877 341 ntBASIC15.27■□□□□ 0.04
MID1O15344 ZNF767P-206ENST00000513792 565 ntBASIC15.27■□□□□ 0.04
MID1O15344 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.27■□□□□ 0.04
MID1O15344 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MID1O15344 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.27■□□□□ 0.04
MID1O15344 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MID1O15344 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.27■□□□□ 0.04
MID1O15344 AC005695.3-201ENST00000614522 232 ntBASIC15.27■□□□□ 0.04
MID1O15344 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.27■□□□□ 0.04
MID1O15344 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MID1O15344 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MID1O15344 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MID1O15344 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MID1O15344 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MID1O15344 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MID1O15344 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MID1O15344 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms