Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC009078.2-202ENST00000463353 338 ntBASIC10.53□□□□□ -0.72
NDUFA1O15239 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.53□□□□□ -0.72
NDUFA1O15239 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.53□□□□□ -0.72
NDUFA1O15239 AL135744.1-201ENST00000565098 629 ntBASIC10.53□□□□□ -0.72
NDUFA1O15239 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.53□□□□□ -0.72
NDUFA1O15239 AC027307.2-201ENST00000591252 911 ntBASIC10.53□□□□□ -0.72
NDUFA1O15239 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.53□□□□□ -0.72
NDUFA1O15239 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 AC027601.4-201ENST00000611259 610 ntBASIC10.53□□□□□ -0.72
NDUFA1O15239 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 C8orf49-201ENST00000525043 1968 ntBASIC10.53□□□□□ -0.72
NDUFA1O15239 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 AC079781.5-202ENST00000641784 3743 ntBASIC10.53□□□□□ -0.72
NDUFA1O15239 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NDUFA1O15239 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NDUFA1O15239 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.53□□□□□ -0.72
NDUFA1O15239 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.72
NDUFA1O15239 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NDUFA1O15239 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
NDUFA1O15239 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NDUFA1O15239 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.52□□□□□ -0.72
NDUFA1O15239 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.52□□□□□ -0.72
NDUFA1O15239 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
NDUFA1O15239 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
NDUFA1O15239 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.52□□□□□ -0.73
NDUFA1O15239 TFAMP1-201ENST00000412727 736 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 AL671277.1-201ENST00000429656 993 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 KRT18P2-201ENST00000447938 1258 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.52□□□□□ -0.73
NDUFA1O15239 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.52□□□□□ -0.73
NDUFA1O15239 IGHV3-62-201ENST00000520057 340 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
NDUFA1O15239 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.52□□□□□ -0.73
NDUFA1O15239 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.52□□□□□ -0.73
NDUFA1O15239 AC061975.2-201ENST00000581722 295 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 AC099522.2-201ENST00000607001 744 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 IL9RP2-201ENST00000423948 1312 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 AC097359.2-201ENST00000604992 2389 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NDUFA1O15239 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NDUFA1O15239 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
NDUFA1O15239 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.52□□□□□ -0.73
NDUFA1O15239 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms