Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 MRPL3P1-201ENST00000400109 1033 ntBASIC13.34□□□□□ -0.27
SHISA3A0PJX4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AC104692.2-201ENST00000603054 253 ntBASIC13.34□□□□□ -0.27
SHISA3A0PJX4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AC090505.1-201ENST00000430515 1834 ntBASIC13.34□□□□□ -0.27
SHISA3A0PJX4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SHISA3A0PJX4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 FO393414.2-201ENST00000405153 598 ntBASIC13.33□□□□□ -0.28
SHISA3A0PJX4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 AC005562.1-201ENST00000583030 3219 ntBASIC13.33□□□□□ -0.28
SHISA3A0PJX4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHISA3A0PJX4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 KRT8P24-201ENST00000560290 1559 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms