Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 C1QBPP1-201ENST00000400117 770 ntBASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AP000845.1-201ENST00000581677 2131 ntBASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 WASH3P-207ENST00000560956 1394 ntBASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCMF1Q9P0J7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 GAPDHP21-201ENST00000450301 1010 ntBASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 AC104581.4-201ENST00000623126 3052 ntBASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCMF1Q9P0J7 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 AC012508.2-201ENST00000567613 1472 ntBASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KCMF1Q9P0J7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms