Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 MTATP6P19-201ENST00000413797 659 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AC134915.1-201ENST00000426461 574 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AL442647.2-201ENST00000429864 857 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AC124283.3-201ENST00000570869 594 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 WFDC1-204ENST00000613603 549 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AC023157.3-201ENST00000619086 2088 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AL133338.1-201ENST00000565695 1517 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 AL359258.3-201ENST00000622910 2331 ntBASIC14.86□□□□□ -0.03
CUEDC1Q9NWM3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 AC112492.5-201ENST00000421897 457 ntBASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 AC022210.1-201ENST00000449856 793 ntBASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 RPL13AP25-201ENST00000484130 612 ntBASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 FAM8A2P-201ENST00000528813 1142 ntBASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 MIR4525-201ENST00000580000 75 ntBASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 NORAD-201ENST00000565493 5339 ntBASIC14.85□□□□□ -0.03
CUEDC1Q9NWM3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms