Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 AC087386.2-201ENST00000623212 4637 ntBASIC13.13□□□□□ -0.31
GCM1Q9NP62 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 RN7SL692P-201ENST00000464677 288 ntBASIC13.13□□□□□ -0.31
GCM1Q9NP62 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 AP005018.1-201ENST00000525475 301 ntBASIC13.13□□□□□ -0.31
GCM1Q9NP62 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 AC025181.2-201ENST00000606994 802 ntBASIC13.13□□□□□ -0.31
GCM1Q9NP62 AC105233.6-201ENST00000642093 218 ntBASIC13.13□□□□□ -0.31
GCM1Q9NP62 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AC136621.1-201ENST00000624017 2304 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AC144831.1-201ENST00000573312 2656 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 INTS4P2-202ENST00000614726 2019 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AC098614.1-201ENST00000368528 745 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 RPL5P21-201ENST00000404620 815 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 AP006294.1-201ENST00000415407 339 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 AC134915.1-201ENST00000426461 574 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AL596325.1-201ENST00000563991 1082 ntBASIC13.12□□□□□ -0.31
GCM1Q9NP62 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms