Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 AC012508.2-201ENST00000567613 1472 ntBASIC15.7■□□□□ 0.1
SP110Q9HB58 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 REXO1L4P-201ENST00000605109 1937 ntBASIC15.7■□□□□ 0.1
SP110Q9HB58 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.7■□□□□ 0.1
SP110Q9HB58 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SP110Q9HB58 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SP110Q9HB58 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SP110Q9HB58 AC007787.1-201ENST00000588095 1583 ntBASIC15.7■□□□□ 0.1
SP110Q9HB58 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SP110Q9HB58 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
SP110Q9HB58 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.7■□□□□ 0.1
SP110Q9HB58 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SP110Q9HB58 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC104457.1-201ENST00000401024 814 ntBASIC15.69■□□□□ 0.1
SP110Q9HB58 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.69■□□□□ 0.1
SP110Q9HB58 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.69■□□□□ 0.1
SP110Q9HB58 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.69■□□□□ 0.1
SP110Q9HB58 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 AL358472.5-202ENST00000641448 1267 ntBASIC15.69■□□□□ 0.1
SP110Q9HB58 AL365209.1-201ENST00000624418 6473 ntBASIC15.69■□□□□ 0.1
SP110Q9HB58 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.69■□□□□ 0.1
SP110Q9HB58 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 MROH4P-201ENST00000431302 1578 ntBASIC15.69■□□□□ 0.1
SP110Q9HB58 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SP110Q9HB58 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.69■□□□□ 0.1
SP110Q9HB58 AC093525.8-201ENST00000624099 1342 ntBASIC15.68■□□□□ 0.1
SP110Q9HB58 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SP110Q9HB58 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SP110Q9HB58 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.68■□□□□ 0.1
SP110Q9HB58 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms