Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 FAM86LP-201ENST00000478302 853 ntBASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRRC40Q9H9A6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 MEP1AP4-201ENST00000423244 1087 ntBASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC40Q9H9A6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 AC007787.1-201ENST00000588095 1583 ntBASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC40Q9H9A6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms