Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 TOMM22P5-201ENST00000416399 439 ntBASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 KRT18P43-201ENST00000469825 1281 ntBASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 HLA-V-204ENST00000476601 1289 ntBASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J3Q9H1A7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 RPSAP43-201ENST00000402237 625 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AC211486.1-202ENST00000416371 468 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 UPF3AP3-201ENST00000420996 769 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 BX842568.4-201ENST00000421222 227 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 RPL13P2-201ENST00000440687 659 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AC112482.1-201ENST00000492080 688 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AC211476.1-201ENST00000503899 468 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AC074044.1-201ENST00000609673 707 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 LINC00628-201ENST00000628516 1289 ntBASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.21□□□□□ -0.13
POLR2J3Q9H1A7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
POLR2J3Q9H1A7 AC117489.1-201ENST00000625169 3217 ntBASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms