Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AL391280.1-201ENST00000506969 1062 ntBASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AC106820.3-201ENST00000561653 397 ntBASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AC104640.1-201ENST00000562617 2109 ntBASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.9■□□□□ 0.14
LRRC3Q9BY71 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC3Q9BY71 TSPY26P-202ENST00000565928 3884 ntBASIC15.9■□□□□ 0.14
LRRC3Q9BY71 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CALR4P-201ENST00000431943 946 ntBASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CHMP1AP1-201ENST00000445563 662 ntBASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PPY2P-201ENST00000582808 702 ntBASIC15.89■□□□□ 0.13
LRRC3Q9BY71 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 OR10B1P-201ENST00000601666 907 ntBASIC15.89■□□□□ 0.13
LRRC3Q9BY71 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AC092384.3-202ENST00000564646 2873 ntBASIC15.89■□□□□ 0.13
LRRC3Q9BY71 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CLUHP2-201ENST00000426660 1303 ntBASIC15.89■□□□□ 0.13
LRRC3Q9BY71 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC3Q9BY71 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 REXO1L5P-201ENST00000622260 2098 ntBASIC15.88■□□□□ 0.13
LRRC3Q9BY71 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC3Q9BY71 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms