Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CNN2P2-201ENST00000443536 909 ntBASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CNN2P3-201ENST00000450201 906 ntBASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 AL136317.3-201ENST00000618497 906 ntBASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 CICP4-201ENST00000447359 2812 ntBASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 KLF2P3-201ENST00000451977 1087 ntBASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 SAMD11P1-201ENST00000571429 661 ntBASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 AC004461.2-201ENST00000629517 803 ntBASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PACSIN1Q9BY11 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AC041040.2-201ENST00000622926 2899 ntBASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AC087499.5-201ENST00000452760 1342 ntBASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AL589987.1-201ENST00000453380 819 ntBASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AC069120.2-201ENST00000524091 540 ntBASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.28■□□□□ 0.2
PACSIN1Q9BY11 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms