Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AL139094.1-201ENST00000405549 1188 ntBASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLF1Q9BQI6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 PPT1-215ENST00000641471 2368 ntBASIC17.77■□□□□ 0.44
SLF1Q9BQI6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 AL645937.2-201ENST00000396808 931 ntBASIC17.77■□□□□ 0.44
SLF1Q9BQI6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 PFN1P12-201ENST00000455938 534 ntBASIC17.77■□□□□ 0.44
SLF1Q9BQI6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RN7SL48P-201ENST00000579283 293 ntBASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 GPR182-203ENST00000622922 591 ntBASIC17.77■□□□□ 0.44
SLF1Q9BQI6 AC006453.4-201ENST00000636949 1252 ntBASIC17.77■□□□□ 0.44
SLF1Q9BQI6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF1Q9BQI6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 LRRC59-203ENST00000576448 1531 ntBASIC17.77■□□□□ 0.43
SLF1Q9BQI6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLF1Q9BQI6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 AL158070.2-201ENST00000623713 1621 ntBASIC17.76■□□□□ 0.43
SLF1Q9BQI6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 MIR1202-201ENST00000408529 83 ntBASIC17.76■□□□□ 0.43
SLF1Q9BQI6 CD8B2-202ENST00000417670 633 ntBASIC17.76■□□□□ 0.43
SLF1Q9BQI6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF1Q9BQI6 FAM86HP-204ENST00000513466 959 ntBASIC17.76■□□□□ 0.43
SLF1Q9BQI6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms