Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EYA3Q99504 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
EYA3Q99504 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
EYA3Q99504 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.41■□□□□ 0.54
EYA3Q99504 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.41■□□□□ 0.54
EYA3Q99504 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
EYA3Q99504 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.41■□□□□ 0.54
EYA3Q99504 FAM58BP-201ENST00000439056 645 ntBASIC18.41■□□□□ 0.54
EYA3Q99504 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.41■□□□□ 0.54
EYA3Q99504 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.41■□□□□ 0.54
EYA3Q99504 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.41■□□□□ 0.54
EYA3Q99504 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 AC009955.4-201ENST00000597192 544 ntBASIC18.41■□□□□ 0.54
EYA3Q99504 SPCS2P2-201ENST00000603270 608 ntBASIC18.41■□□□□ 0.54
EYA3Q99504 MIR6727-201ENST00000620702 65 ntBASIC18.41■□□□□ 0.54
EYA3Q99504 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
EYA3Q99504 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.41■□□□□ 0.54
EYA3Q99504 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EYA3Q99504 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 DOC2GP-204ENST00000639052 2548 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.4■□□□□ 0.54
EYA3Q99504 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 AC006335.1-201ENST00000445200 547 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 PUDPP3-201ENST00000445368 636 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 EEF1DP6-201ENST00000449232 372 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.4■□□□□ 0.54
EYA3Q99504 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.4■□□□□ 0.54
EYA3Q99504 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
EYA3Q99504 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.4■□□□□ 0.54
EYA3Q99504 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
EYA3Q99504 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.4■□□□□ 0.54
EYA3Q99504 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.4■□□□□ 0.54
EYA3Q99504 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.4■□□□□ 0.54
EYA3Q99504 AC090164.2-201ENST00000611487 516 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 AL157791.1-201ENST00000553667 1699 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 SHC1P1-201ENST00000425230 1745 ntBASIC18.4■□□□□ 0.54
EYA3Q99504 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.4■□□□□ 0.54
EYA3Q99504 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
EYA3Q99504 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EYA3Q99504 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.39■□□□□ 0.54
EYA3Q99504 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
EYA3Q99504 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.39■□□□□ 0.54
EYA3Q99504 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.39■□□□□ 0.54
EYA3Q99504 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EYA3Q99504 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
EYA3Q99504 PCDHA1-201ENST00000378133 2726 ntBASIC18.39■□□□□ 0.53
EYA3Q99504 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
EYA3Q99504 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
EYA3Q99504 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 MIR33B-201ENST00000385104 96 ntBASIC18.39■□□□□ 0.53
EYA3Q99504 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
EYA3Q99504 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms