Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 ACE3P-201ENST00000423435 1973 ntBASIC12.72□□□□□ -0.37
GAFA1Q96PS6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GAFA1Q96PS6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 CU639417.3-201ENST00000624240 1404 ntBASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 AC022137.2-201ENST00000503482 481 ntBASIC12.71□□□□□ -0.37
GAFA1Q96PS6 KRT18P25-201ENST00000508931 1278 ntBASIC12.71□□□□□ -0.37
GAFA1Q96PS6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TDH-203ENST00000531764 1110 ntBASIC12.71□□□□□ -0.37
GAFA1Q96PS6 AC005225.4-201ENST00000557330 545 ntBASIC12.71□□□□□ -0.37
GAFA1Q96PS6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GAFA1Q96PS6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.71□□□□□ -0.38
GAFA1Q96PS6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 KRT8P35-201ENST00000483942 1338 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AL512384.1-201ENST00000406683 331 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 NME2P1-201ENST00000426182 414 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC007389.4-201ENST00000454674 793 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC068587.3-201ENST00000526613 355 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 PTP4A1P2-201ENST00000546033 454 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms