Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SGCDQ92629 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.09□□□□□ -0.15
SGCDQ92629 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SGCDQ92629 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCDQ92629 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SGCDQ92629 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SGCDQ92629 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SGCDQ92629 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SGCDQ92629 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 AC023090.2-201ENST00000625182 2110 ntBASIC14.08□□□□□ -0.16
SGCDQ92629 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCDQ92629 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCDQ92629 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SGCDQ92629 AC004987.2-201ENST00000395959 1148 ntBASIC14.08□□□□□ -0.16
SGCDQ92629 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 SCARNA2-201ENST00000458748 420 ntBASIC14.08□□□□□ -0.16
SGCDQ92629 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCDQ92629 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.08□□□□□ -0.16
SGCDQ92629 AL356488.2-201ENST00000602755 427 ntBASIC14.08□□□□□ -0.16
SGCDQ92629 AC104692.2-201ENST00000603054 253 ntBASIC14.08□□□□□ -0.16
SGCDQ92629 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SGCDQ92629 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 AL607033.1-201ENST00000623900 1599 ntBASIC14.08□□□□□ -0.16
SGCDQ92629 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SGCDQ92629 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.08□□□□□ -0.16
SGCDQ92629 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCDQ92629 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.07□□□□□ -0.16
SGCDQ92629 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
SGCDQ92629 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.07□□□□□ -0.16
SGCDQ92629 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SGCDQ92629 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SGCDQ92629 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SGCDQ92629 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SGCDQ92629 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.07□□□□□ -0.16
SGCDQ92629 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.07□□□□□ -0.16
SGCDQ92629 RPS8P6-201ENST00000426177 609 ntBASIC14.07□□□□□ -0.16
SGCDQ92629 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.07□□□□□ -0.16
SGCDQ92629 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.07□□□□□ -0.16
SGCDQ92629 AC011467.4-201ENST00000594891 528 ntBASIC14.07□□□□□ -0.16
SGCDQ92629 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.07□□□□□ -0.16
SGCDQ92629 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCDQ92629 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCDQ92629 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms