Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AC098859.1-201ENST00000502915 1238 ntBASIC13.32□□□□□ -0.28
BEST4Q8NFU0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 AL121912.1-201ENST00000603683 238 ntBASIC13.32□□□□□ -0.28
BEST4Q8NFU0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BEST4Q8NFU0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AL359881.3-201ENST00000602640 1721 ntBASIC13.31□□□□□ -0.28
BEST4Q8NFU0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC098831.1-202ENST00000438821 336 ntBASIC13.31□□□□□ -0.28
BEST4Q8NFU0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC061975.2-201ENST00000581722 295 ntBASIC13.31□□□□□ -0.28
BEST4Q8NFU0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC148477.8-201ENST00000624298 468 ntBASIC13.31□□□□□ -0.28
BEST4Q8NFU0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC011474.4-201ENST00000623523 2076 ntBASIC13.31□□□□□ -0.28
BEST4Q8NFU0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 AC018529.2-202ENST00000611482 3087 ntBASIC13.31□□□□□ -0.28
BEST4Q8NFU0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BEST4Q8NFU0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AC152010.1-201ENST00000415779 2006 ntBASIC13.3□□□□□ -0.28
BEST4Q8NFU0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms