Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 HNRNPUP1-201ENST00000554987 333 ntBASIC11.5□□□□□ -0.57
NUP35Q8NFH5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 DMBT1P1-203ENST00000636837 4628 ntBASIC11.5□□□□□ -0.57
NUP35Q8NFH5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NUP35Q8NFH5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AL136982.4-201ENST00000437689 1740 ntBASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AC021087.4-201ENST00000563761 564 ntBASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AC008608.2-201ENST00000606089 416 ntBASIC11.49□□□□□ -0.57
NUP35Q8NFH5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AC004790.2-201ENST00000623588 572 ntBASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AL031595.1-201ENST00000623969 4709 ntBASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.49□□□□□ -0.57
NUP35Q8NFH5 Z82170.1-201ENST00000625081 3192 ntBASIC11.49□□□□□ -0.57
NUP35Q8NFH5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms