Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 PRAL-201ENST00000624952 3286 ntBASIC15.59■□□□□ 0.09
CHPFQ8IZ52 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 AC148477.4-201ENST00000613430 1793 ntBASIC15.59■□□□□ 0.09
CHPFQ8IZ52 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHPFQ8IZ52 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 AL354989.2-201ENST00000435838 1540 ntBASIC15.58■□□□□ 0.09
CHPFQ8IZ52 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 C8orf49-201ENST00000525043 1968 ntBASIC15.58■□□□□ 0.09
CHPFQ8IZ52 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHPFQ8IZ52 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AC144831.1-201ENST00000573312 2656 ntBASIC15.58■□□□□ 0.08
CHPFQ8IZ52 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 ECM1P1-201ENST00000604092 1279 ntBASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AL118558.3-201ENST00000607414 1079 ntBASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHPFQ8IZ52 AC084364.1-201ENST00000551967 1556 ntBASIC15.58■□□□□ 0.08
CHPFQ8IZ52 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AC127383.1-201ENST00000444697 1800 ntBASIC15.57■□□□□ 0.08
CHPFQ8IZ52 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 BCYRN1-201ENST00000418539 200 ntBASIC15.57■□□□□ 0.08
CHPFQ8IZ52 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AC023824.1-201ENST00000562945 2975 ntBASIC15.57■□□□□ 0.08
CHPFQ8IZ52 RN7SL48P-201ENST00000579283 293 ntBASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.57■□□□□ 0.08
CHPFQ8IZ52 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms