Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC104596.2-201ENST00000512793 793 ntBASIC18.31■□□□□ 0.52
RNF20Q5VTR2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 AJ011932.1-201ENST00000621707 465 ntBASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CICP23-201ENST00000605013 2741 ntBASIC18.31■□□□□ 0.52
RNF20Q5VTR2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 AC007787.1-201ENST00000588095 1583 ntBASIC18.3■□□□□ 0.52
RNF20Q5VTR2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 GNAQP1-201ENST00000444815 1067 ntBASIC18.3■□□□□ 0.52
RNF20Q5VTR2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 AC107373.2-201ENST00000607735 490 ntBASIC18.3■□□□□ 0.52
RNF20Q5VTR2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF20Q5VTR2 SLC7A15P-201ENST00000424028 1363 ntBASIC18.3■□□□□ 0.52
RNF20Q5VTR2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AL138799.1-201ENST00000448213 1675 ntBASIC18.29■□□□□ 0.52
RNF20Q5VTR2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 VDAC1P7-201ENST00000462417 847 ntBASIC18.29■□□□□ 0.52
RNF20Q5VTR2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AC093813.1-201ENST00000605066 256 ntBASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AL662799.1-202ENST00000614205 422 ntBASIC18.29■□□□□ 0.52
RNF20Q5VTR2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AL359258.3-201ENST00000622910 2331 ntBASIC18.29■□□□□ 0.52
RNF20Q5VTR2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF20Q5VTR2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF20Q5VTR2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms