Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 AC093826.1-201ENST00000508655 993 ntBASIC14.59□□□□□ -0.07
RIF1Q5UIP0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 AC002044.2-201ENST00000624910 970 ntBASIC14.59□□□□□ -0.07
RIF1Q5UIP0 CTBP2P8-201ENST00000422584 1330 ntBASIC14.59□□□□□ -0.07
RIF1Q5UIP0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 NEFHP1-201ENST00000412845 2629 ntBASIC14.59□□□□□ -0.07
RIF1Q5UIP0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 RNA5SP417-201ENST00000516459 108 ntBASIC14.58□□□□□ -0.07
RIF1Q5UIP0 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 MIR3188-201ENST00000583494 85 ntBASIC14.58□□□□□ -0.07
RIF1Q5UIP0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.58□□□□□ -0.07
RIF1Q5UIP0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RIF1Q5UIP0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 TREHP1-201ENST00000531328 465 ntBASIC14.57□□□□□ -0.08
RIF1Q5UIP0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 MIR6125-201ENST00000618986 96 ntBASIC14.57□□□□□ -0.08
RIF1Q5UIP0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms