Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL606495.2-201ENST00000605867 535 ntBASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 MIR6869-201ENST00000619434 62 ntBASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 AGAP7P-201ENST00000582299 2062 ntBASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 AGAP14-201ENST00000624701 2060 ntBASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 FER1L4-210ENST00000615531 5998 ntBASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC144BQ3MJ40 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 MSTO2P-201ENST00000314835 1709 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 TUBB1P2-201ENST00000422712 1306 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 TUBB1P1-201ENST00000503144 1300 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 BAATP1-201ENST00000412284 1225 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AL355994.2-201ENST00000447882 704 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AP000812.2-201ENST00000538934 718 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AC009486.1-201ENST00000569860 813 ntBASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC144BQ3MJ40 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 AC007686.3-201ENST00000619017 3487 ntBASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 BRWD1P1-201ENST00000401091 371 ntBASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 FAM21FP-201ENST00000426241 1131 ntBASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 FTH1P14-201ENST00000482930 551 ntBASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 AC005252.2-201ENST00000624630 1141 ntBASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC144BQ3MJ40 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms