Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RFX4Q33E94 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.32□□□□□ -0.12
RFX4Q33E94 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RFX4Q33E94 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.32□□□□□ -0.12
RFX4Q33E94 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RFX4Q33E94 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RFX4Q33E94 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFX4Q33E94 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.31□□□□□ -0.12
RFX4Q33E94 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 AC097359.2-201ENST00000604992 2389 ntBASIC14.31□□□□□ -0.12
RFX4Q33E94 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 AC018442.1-201ENST00000421439 2061 ntBASIC14.31□□□□□ -0.12
RFX4Q33E94 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 ADH5P3-201ENST00000433842 1137 ntBASIC14.31□□□□□ -0.12
RFX4Q33E94 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
RFX4Q33E94 IGHV3-62-201ENST00000520057 340 ntBASIC14.31□□□□□ -0.12
RFX4Q33E94 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.31□□□□□ -0.12
RFX4Q33E94 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.31□□□□□ -0.12
RFX4Q33E94 AP000845.1-201ENST00000581677 2131 ntBASIC14.31□□□□□ -0.12
RFX4Q33E94 AC026979.3-201ENST00000607315 403 ntBASIC14.31□□□□□ -0.12
RFX4Q33E94 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.31□□□□□ -0.12
RFX4Q33E94 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFX4Q33E94 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.31□□□□□ -0.12
RFX4Q33E94 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RFX4Q33E94 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RFX4Q33E94 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.3□□□□□ -0.12
RFX4Q33E94 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.3□□□□□ -0.12
RFX4Q33E94 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFX4Q33E94 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFX4Q33E94 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
RFX4Q33E94 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFX4Q33E94 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.3□□□□□ -0.12
RFX4Q33E94 AC018529.2-202ENST00000611482 3087 ntBASIC14.3□□□□□ -0.12
RFX4Q33E94 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.3□□□□□ -0.12
RFX4Q33E94 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.3□□□□□ -0.12
RFX4Q33E94 AC079140.1-201ENST00000508039 487 ntBASIC14.3□□□□□ -0.12
RFX4Q33E94 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFX4Q33E94 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.3□□□□□ -0.12
RFX4Q33E94 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.3□□□□□ -0.12
RFX4Q33E94 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.3□□□□□ -0.12
RFX4Q33E94 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms