Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AC022616.1-201ENST00000518688 554 ntBASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.36■□□□□ 0.53
RFX7Q2KHR2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 ECM1P1-201ENST00000604092 1279 ntBASIC18.36■□□□□ 0.53
RFX7Q2KHR2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 REXO1L5P-201ENST00000622260 2098 ntBASIC18.36■□□□□ 0.53
RFX7Q2KHR2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 BRWD1P1-201ENST00000401091 371 ntBASIC18.35■□□□□ 0.53
RFX7Q2KHR2 MIR1247-201ENST00000408206 136 ntBASIC18.35■□□□□ 0.53
RFX7Q2KHR2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 AC244093.1-201ENST00000610837 814 ntBASIC18.35■□□□□ 0.53
RFX7Q2KHR2 AC005695.3-201ENST00000614522 232 ntBASIC18.35■□□□□ 0.53
RFX7Q2KHR2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.35■□□□□ 0.53
RFX7Q2KHR2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AC006453.4-201ENST00000636949 1252 ntBASIC18.34■□□□□ 0.53
RFX7Q2KHR2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AL137783.1-201ENST00000623494 1896 ntBASIC18.34■□□□□ 0.53
RFX7Q2KHR2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX7Q2KHR2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 RNA5SP486-201ENST00000515961 83 ntBASIC18.33■□□□□ 0.53
RFX7Q2KHR2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 RN7SL48P-201ENST00000579283 293 ntBASIC18.33■□□□□ 0.53
RFX7Q2KHR2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms