Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ASIC1P78348 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 AC004066.1-201ENST00000502488 802 ntBASIC17.11■□□□□ 0.33
ASIC1P78348 GAPDHP40-201ENST00000505218 1006 ntBASIC17.11■□□□□ 0.33
ASIC1P78348 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.11■□□□□ 0.33
ASIC1P78348 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.11■□□□□ 0.33
ASIC1P78348 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.11■□□□□ 0.33
ASIC1P78348 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ASIC1P78348 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ASIC1P78348 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ASIC1P78348 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ASIC1P78348 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.1■□□□□ 0.33
ASIC1P78348 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 VDAC1P7-201ENST00000462417 847 ntBASIC17.1■□□□□ 0.33
ASIC1P78348 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.1■□□□□ 0.33
ASIC1P78348 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ASIC1P78348 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.1■□□□□ 0.33
ASIC1P78348 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 AC107373.2-201ENST00000607735 490 ntBASIC17.1■□□□□ 0.33
ASIC1P78348 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ASIC1P78348 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 DRD5P1-201ENST00000456605 1438 ntBASIC17.1■□□□□ 0.33
ASIC1P78348 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.1■□□□□ 0.33
ASIC1P78348 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ASIC1P78348 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms