Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RPS3AP61247 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.47□□□□□ -0.09
RPS3AP61247 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.47□□□□□ -0.09
RPS3AP61247 AC092580.3-201ENST00000430932 139 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.47□□□□□ -0.09
RPS3AP61247 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.47□□□□□ -0.09
RPS3AP61247 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.47□□□□□ -0.09
RPS3AP61247 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.47□□□□□ -0.09
RPS3AP61247 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.47□□□□□ -0.09
RPS3AP61247 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RPS3AP61247 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.47□□□□□ -0.09
RPS3AP61247 BANF1P1-201ENST00000553684 263 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 SPCS2P1-201ENST00000561636 679 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 AL096865.1-201ENST00000606796 927 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 AJ011932.1-201ENST00000621707 465 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.47□□□□□ -0.09
RPS3AP61247 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.47□□□□□ -0.09
RPS3AP61247 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.47□□□□□ -0.09
RPS3AP61247 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
RPS3AP61247 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RPS3AP61247 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.47□□□□□ -0.09
RPS3AP61247 AC112693.3-201ENST00000624819 1983 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 C18orf15-201ENST00000623680 2534 ntBASIC14.47□□□□□ -0.09
RPS3AP61247 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RPS3AP61247 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.47□□□□□ -0.09
RPS3AP61247 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPS3AP61247 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RPS3AP61247 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.46□□□□□ -0.09
RPS3AP61247 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.46□□□□□ -0.09
RPS3AP61247 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 HAUS4P1-201ENST00000406739 1145 ntBASIC14.46□□□□□ -0.09
RPS3AP61247 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 AC092364.2-202ENST00000597012 1073 ntBASIC14.46□□□□□ -0.09
RPS3AP61247 AL390955.2-201ENST00000603032 514 ntBASIC14.46□□□□□ -0.09
RPS3AP61247 AL133215.2-201ENST00000609242 977 ntBASIC14.46□□□□□ -0.09
RPS3AP61247 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RPS3AP61247 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
RPS3AP61247 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.46□□□□□ -0.09
RPS3AP61247 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RPS3AP61247 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.46□□□□□ -0.1
RPS3AP61247 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.46□□□□□ -0.1
RPS3AP61247 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.46□□□□□ -0.1
RPS3AP61247 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RPS3AP61247 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.1
RPS3AP61247 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS3AP61247 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms