Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ZNF767P-206ENST00000513792 565 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN3P51790 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN3P51790 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.73■□□□□ 0.27
CLCN3P51790 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 AC073413.1-201ENST00000603927 732 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 AL118558.3-201ENST00000607414 1079 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 AC005695.3-201ENST00000614522 232 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 AL023775.1-201ENST00000454907 1746 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 AC012508.2-201ENST00000567613 1472 ntBASIC16.73■□□□□ 0.27
CLCN3P51790 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN3P51790 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLCN3P51790 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLCN3P51790 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.72■□□□□ 0.27
CLCN3P51790 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLCN3P51790 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 AC015818.8-201ENST00000587907 1519 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLCN3P51790 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLCN3P51790 AC106820.3-201ENST00000561653 397 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 PPY2P-201ENST00000582808 702 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 AC244093.1-201ENST00000610837 814 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 AC138466.3-201ENST00000619983 221 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.72■□□□□ 0.27
CLCN3P51790 AL603764.1-201ENST00000636452 321 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 AC020907.1-201ENST00000616460 1350 ntBASIC16.72■□□□□ 0.27
CLCN3P51790 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN3P51790 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN3P51790 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN3P51790 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCN3P51790 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLCN3P51790 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN3P51790 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN3P51790 AL591846.1-201ENST00000451736 433 ntBASIC16.71■□□□□ 0.27
CLCN3P51790 AC104306.2-201ENST00000451877 341 ntBASIC16.71■□□□□ 0.27
CLCN3P51790 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms