Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.12■□□□□ 0.17
GRIK1P39086 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GRIK1P39086 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 AC099336.1-201ENST00000417053 1171 ntBASIC16.12■□□□□ 0.17
GRIK1P39086 FAM197Y7-201ENST00000432892 766 ntBASIC16.12■□□□□ 0.17
GRIK1P39086 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.12■□□□□ 0.17
GRIK1P39086 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.12■□□□□ 0.17
GRIK1P39086 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.12■□□□□ 0.17
GRIK1P39086 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GRIK1P39086 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 AC126755.1-201ENST00000525846 6405 ntBASIC16.12■□□□□ 0.17
GRIK1P39086 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GRIK1P39086 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 TMBIM7P-203ENST00000641617 1718 ntBASIC16.11■□□□□ 0.17
GRIK1P39086 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
GRIK1P39086 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 AC104457.1-201ENST00000401024 814 ntBASIC16.11■□□□□ 0.17
GRIK1P39086 CNN2P8-201ENST00000421872 913 ntBASIC16.11■□□□□ 0.17
GRIK1P39086 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.11■□□□□ 0.17
GRIK1P39086 FO681548.1-201ENST00000455617 1132 ntBASIC16.11■□□□□ 0.17
GRIK1P39086 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.11■□□□□ 0.17
GRIK1P39086 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.11■□□□□ 0.17
GRIK1P39086 AC079316.1-201ENST00000548397 411 ntBASIC16.11■□□□□ 0.17
GRIK1P39086 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GRIK1P39086 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.11■□□□□ 0.17
GRIK1P39086 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
GRIK1P39086 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.11■□□□□ 0.17
GRIK1P39086 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GRIK1P39086 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 C18orf15-201ENST00000623680 2534 ntBASIC16.11■□□□□ 0.17
GRIK1P39086 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GRIK1P39086 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GRIK1P39086 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GRIK1P39086 REXO1L5P-201ENST00000622260 2098 ntBASIC16.1■□□□□ 0.17
GRIK1P39086 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GRIK1P39086 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.1■□□□□ 0.17
GRIK1P39086 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GRIK1P39086 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.1■□□□□ 0.17
GRIK1P39086 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GRIK1P39086 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GRIK1P39086 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.1■□□□□ 0.17
GRIK1P39086 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms