Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC2P35250 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC2P35250 AC012441.2-201ENST00000444843 739 ntBASIC16.43■□□□□ 0.22
RFC2P35250 AC098935.1-201ENST00000446057 611 ntBASIC16.43■□□□□ 0.22
RFC2P35250 RCC2P8-201ENST00000502779 1035 ntBASIC16.43■□□□□ 0.22
RFC2P35250 AC116345.2-201ENST00000512837 523 ntBASIC16.43■□□□□ 0.22
RFC2P35250 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC2P35250 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.43■□□□□ 0.22
RFC2P35250 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC2P35250 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
RFC2P35250 AC009779.1-201ENST00000551138 283 ntBASIC16.43■□□□□ 0.22
RFC2P35250 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC2P35250 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC2P35250 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC2P35250 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFC2P35250 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RFC2P35250 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC2P35250 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFC2P35250 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RFC2P35250 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC2P35250 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.42■□□□□ 0.22
RFC2P35250 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RFC2P35250 MIR4754-201ENST00000582477 89 ntBASIC16.42■□□□□ 0.22
RFC2P35250 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.42■□□□□ 0.22
RFC2P35250 AC138696.2-201ENST00000607376 223 ntBASIC16.42■□□□□ 0.22
RFC2P35250 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 AC073352.2-201ENST00000609385 439 ntBASIC16.42■□□□□ 0.22
RFC2P35250 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
RFC2P35250 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RFC2P35250 AC011491.1-203ENST00000637688 543 ntBASIC16.42■□□□□ 0.22
RFC2P35250 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 AL360270.3-201ENST00000609118 1348 ntBASIC16.42■□□□□ 0.22
RFC2P35250 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC2P35250 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC2P35250 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFC2P35250 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC2P35250 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFC2P35250 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFC2P35250 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RFC2P35250 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC2P35250 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC2P35250 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC2P35250 HLA-J-204ENST00000495278 958 ntBASIC16.41■□□□□ 0.22
RFC2P35250 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
RFC2P35250 IGLV3-15-201ENST00000518356 244 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms