Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP1P29466 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP1P29466 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP1P29466 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASP1P29466 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.11■□□□□ 0.33
CASP1P29466 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.11■□□□□ 0.33
CASP1P29466 VDAC1P7-201ENST00000462417 847 ntBASIC17.11■□□□□ 0.33
CASP1P29466 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
CASP1P29466 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.11■□□□□ 0.33
CASP1P29466 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.11■□□□□ 0.33
CASP1P29466 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.11■□□□□ 0.33
CASP1P29466 RARRES2P5-201ENST00000564013 466 ntBASIC17.11■□□□□ 0.33
CASP1P29466 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.11■□□□□ 0.33
CASP1P29466 AC107373.2-201ENST00000607735 490 ntBASIC17.11■□□□□ 0.33
CASP1P29466 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CASP1P29466 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 LILRP1-201ENST00000444199 1370 ntBASIC17.11■□□□□ 0.33
CASP1P29466 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CASP1P29466 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASP1P29466 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP1P29466 AC007787.1-201ENST00000588095 1583 ntBASIC17.11■□□□□ 0.33
CASP1P29466 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.1■□□□□ 0.33
CASP1P29466 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 MIR661-201ENST00000384842 89 ntBASIC17.1■□□□□ 0.33
CASP1P29466 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CASP1P29466 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.1■□□□□ 0.33
CASP1P29466 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 RN7SL399P-201ENST00000471648 279 ntBASIC17.1■□□□□ 0.33
CASP1P29466 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CASP1P29466 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.1■□□□□ 0.33
CASP1P29466 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.1■□□□□ 0.33
CASP1P29466 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.1■□□□□ 0.33
CASP1P29466 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.1■□□□□ 0.33
CASP1P29466 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 AC027796.2-201ENST00000575326 344 ntBASIC17.1■□□□□ 0.33
CASP1P29466 AL049840.4-201ENST00000602422 811 ntBASIC17.1■□□□□ 0.33
CASP1P29466 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CASP1P29466 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.1■□□□□ 0.33
CASP1P29466 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP1P29466 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP1P29466 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms