Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC19.48■□□□□ 0.71
RXRBP28702 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 AL035414.1-201ENST00000451327 857 ntBASIC19.48■□□□□ 0.71
RXRBP28702 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 GPX3-202ENST00000517973 612 ntTSL 3 BASIC19.48■□□□□ 0.71
RXRBP28702 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC19.48■□□□□ 0.71
RXRBP28702 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.48■□□□□ 0.71
RXRBP28702 AC020904.3-201ENST00000624199 442 ntBASIC19.48■□□□□ 0.71
RXRBP28702 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RXRBP28702 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RXRBP28702 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRBP28702 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RXRBP28702 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RXRBP28702 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RXRBP28702 AL121949.3-201ENST00000406684 385 ntBASIC19.47■□□□□ 0.71
RXRBP28702 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.47■□□□□ 0.71
RXRBP28702 AC098657.1-201ENST00000416270 1135 ntBASIC19.47■□□□□ 0.71
RXRBP28702 AC073869.2-201ENST00000417338 1026 ntBASIC19.47■□□□□ 0.71
RXRBP28702 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.47■□□□□ 0.71
RXRBP28702 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC19.47■□□□□ 0.71
RXRBP28702 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC19.47■□□□□ 0.71
RXRBP28702 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RXRBP28702 AC005915.1-201ENST00000624912 2018 ntBASIC19.47■□□□□ 0.71
RXRBP28702 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RXRBP28702 AHCYP4-201ENST00000419201 1315 ntBASIC19.47■□□□□ 0.71
RXRBP28702 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRBP28702 AC006449.5-201ENST00000610658 2098 ntBASIC19.47■□□□□ 0.71
RXRBP28702 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRBP28702 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRBP28702 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 AC006372.4-201ENST00000624122 1543 ntBASIC19.46■□□□□ 0.71
RXRBP28702 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 AC018695.7-201ENST00000624587 2492 ntBASIC19.46■□□□□ 0.71
RXRBP28702 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.46■□□□□ 0.71
RXRBP28702 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 NEK4P3-201ENST00000604859 544 ntBASIC19.46■□□□□ 0.71
RXRBP28702 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC19.46■□□□□ 0.71
RXRBP28702 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RXRBP28702 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RXRBP28702 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RXRBP28702 TEKT4P2-202ENST00000559466 1312 ntBASIC19.46■□□□□ 0.71
RXRBP28702 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.46■□□□□ 0.71
RXRBP28702 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 PP12613-201ENST00000424958 2230 ntBASIC19.45■□□□□ 0.7
RXRBP28702 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
RXRBP28702 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 AL157414.3-201ENST00000624276 1954 ntBASIC19.45■□□□□ 0.7
RXRBP28702 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms