Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AL513523.2-202ENST00000427283 2040 ntBASIC14.63□□□□□ -0.07
LAMA1P25391 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMA1P25391 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMA1P25391 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 PHBP15-201ENST00000574228 665 ntBASIC14.63□□□□□ -0.07
LAMA1P25391 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.63□□□□□ -0.07
LAMA1P25391 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMA1P25391 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 RPL7P35-201ENST00000446943 740 ntBASIC14.63□□□□□ -0.07
LAMA1P25391 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LAMA1P25391 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMA1P25391 MRPL22P1-201ENST00000505398 616 ntBASIC14.63□□□□□ -0.07
LAMA1P25391 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMA1P25391 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMA1P25391 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.63□□□□□ -0.07
LAMA1P25391 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LAMA1P25391 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMA1P25391 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LAMA1P25391 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMA1P25391 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 VDAC1P1-201ENST00000439229 848 ntBASIC14.62□□□□□ -0.07
LAMA1P25391 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.62□□□□□ -0.07
LAMA1P25391 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.62□□□□□ -0.07
LAMA1P25391 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 SCARNA21-201ENST00000517026 139 ntBASIC14.62□□□□□ -0.07
LAMA1P25391 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC14.62□□□□□ -0.07
LAMA1P25391 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LAMA1P25391 AL512430.1-201ENST00000392575 860 ntBASIC14.62□□□□□ -0.07
LAMA1P25391 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 TUBB8P8-201ENST00000458717 1058 ntBASIC14.62□□□□□ -0.07
LAMA1P25391 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LAMA1P25391 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
LAMA1P25391 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 EIF5AP2-201ENST00000585668 1047 ntBASIC14.62□□□□□ -0.07
LAMA1P25391 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LAMA1P25391 AC084781.1-201ENST00000613737 656 ntBASIC14.62□□□□□ -0.07
LAMA1P25391 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMA1P25391 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.61□□□□□ -0.07
LAMA1P25391 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LAMA1P25391 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LAMA1P25391 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.61□□□□□ -0.07
LAMA1P25391 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LAMA1P25391 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.61□□□□□ -0.07
LAMA1P25391 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.61□□□□□ -0.07
LAMA1P25391 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.61□□□□□ -0.07
LAMA1P25391 AC005041.3-201ENST00000606287 649 ntBASIC14.61□□□□□ -0.07
LAMA1P25391 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LAMA1P25391 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LAMA1P25391 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LAMA1P25391 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LAMA1P25391 IL9RP3-201ENST00000442856 1674 ntBASIC14.61□□□□□ -0.07
LAMA1P25391 AC006058.4-201ENST00000624016 1670 ntBASIC14.61□□□□□ -0.07
LAMA1P25391 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.61□□□□□ -0.07
LAMA1P25391 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
LAMA1P25391 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.61□□□□□ -0.07
LAMA1P25391 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LAMA1P25391 CICP23-201ENST00000605013 2741 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms