Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APCP25054 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
APCP25054 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APCP25054 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.47□□□□□ -0.41
APCP25054 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.47□□□□□ -0.41
APCP25054 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.47□□□□□ -0.41
APCP25054 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APCP25054 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
APCP25054 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.47□□□□□ -0.41
APCP25054 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APCP25054 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APCP25054 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APCP25054 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.47□□□□□ -0.41
APCP25054 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.47□□□□□ -0.41
APCP25054 AC084262.1-201ENST00000567818 751 ntBASIC12.47□□□□□ -0.41
APCP25054 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.47□□□□□ -0.41
APCP25054 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.47□□□□□ -0.41
APCP25054 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
APCP25054 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.46□□□□□ -0.41
APCP25054 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
APCP25054 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.46□□□□□ -0.41
APCP25054 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.46□□□□□ -0.41
APCP25054 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
APCP25054 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.46□□□□□ -0.41
APCP25054 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
APCP25054 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.46□□□□□ -0.41
APCP25054 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.46□□□□□ -0.41
APCP25054 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC12.46□□□□□ -0.41
APCP25054 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.46□□□□□ -0.41
APCP25054 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.46□□□□□ -0.41
APCP25054 AC010976.2-201ENST00000609697 852 ntBASIC12.46□□□□□ -0.41
APCP25054 PSME2-217ENST00000615264 874 ntTSL 5 BASIC12.46□□□□□ -0.41
APCP25054 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.46□□□□□ -0.41
APCP25054 PSME2-218ENST00000630027 185 ntTSL 3 BASIC12.46□□□□□ -0.41
APCP25054 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
APCP25054 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
APCP25054 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.46□□□□□ -0.41
APCP25054 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
APCP25054 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 AGGF1P2-201ENST00000426656 2106 ntBASIC12.46□□□□□ -0.41
APCP25054 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APCP25054 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APCP25054 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
APCP25054 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APCP25054 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.46□□□□□ -0.42
APCP25054 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.46□□□□□ -0.42
APCP25054 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APCP25054 ALG3P1-201ENST00000508806 1114 ntBASIC12.46□□□□□ -0.42
APCP25054 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.46□□□□□ -0.42
APCP25054 AC068831.5-201ENST00000557387 328 ntBASIC12.46□□□□□ -0.42
APCP25054 AC142086.5-202ENST00000562500 217 ntBASIC12.46□□□□□ -0.42
APCP25054 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APCP25054 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.46□□□□□ -0.42
APCP25054 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.46□□□□□ -0.42
APCP25054 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
APCP25054 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
APCP25054 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.45□□□□□ -0.42
APCP25054 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.45□□□□□ -0.42
APCP25054 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.45□□□□□ -0.42
APCP25054 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APCP25054 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APCP25054 JPT2-203ENST00000382711 894 ntTSL 4 BASIC12.45□□□□□ -0.42
APCP25054 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.45□□□□□ -0.42
APCP25054 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.45□□□□□ -0.42
APCP25054 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APCP25054 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
APCP25054 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.45□□□□□ -0.42
APCP25054 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.45□□□□□ -0.42
APCP25054 AL451000.1-201ENST00000451300 1186 ntBASIC12.45□□□□□ -0.42
APCP25054 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms