Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 AC106881.1-201ENST00000605849 3329 ntBASIC15.11■□□□□ 0.01
CDH3P22223 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 AC010491.1-201ENST00000563101 2797 ntBASIC15.11■□□□□ 0.01
CDH3P22223 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDH3P22223 AL122018.1-201ENST00000446607 2310 ntBASIC15.1■□□□□ 0.01
CDH3P22223 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
CDH3P22223 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 INE1-201ENST00000456273 945 ntBASIC15.1■□□□□ 0.01
CDH3P22223 KRT18P43-201ENST00000469825 1281 ntBASIC15.1■□□□□ 0.01
CDH3P22223 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH3P22223 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CDH3P22223 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH3P22223 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDH3P22223 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH3P22223 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH3P22223 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH3P22223 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH3P22223 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 AC007686.3-201ENST00000619017 3487 ntBASIC15.09■□□□□ 0.01
CDH3P22223 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH3P22223 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH3P22223 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH3P22223 AC092552.1-201ENST00000547243 906 ntBASIC15.09■□□□□ 0.01
CDH3P22223 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH3P22223 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 WFDC1-204ENST00000613603 549 ntBASIC15.09■□□□□ 0.01
CDH3P22223 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH3P22223 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms