Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AC073347.1-201ENST00000421633 2643 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AC018665.1-201ENST00000622927 1362 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ANKRD19P-201ENST00000338192 862 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AC074338.1-201ENST00000416825 156 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AL359711.2-201ENST00000563105 872 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AP000240.1-201ENST00000609910 452 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 MIR6775-201ENST00000617557 69 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AC022532.1-201ENST00000624563 1728 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 TNRC18P2-201ENST00000417666 2714 ntBASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 INTS4P2-202ENST00000614726 2019 ntBASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCNYL3P0C7X3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms