Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.18□□□□□ -0.46
IFNA1P01562 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
IFNA1P01562 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
IFNA1P01562 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 AC113347.1-201ENST00000413321 391 ntBASIC12.18□□□□□ -0.46
IFNA1P01562 TPT1P11-201ENST00000458482 498 ntBASIC12.18□□□□□ -0.46
IFNA1P01562 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.18□□□□□ -0.46
IFNA1P01562 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 NKAPP1-205ENST00000585790 367 ntBASIC12.18□□□□□ -0.46
IFNA1P01562 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
IFNA1P01562 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
IFNA1P01562 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 AC018529.2-202ENST00000611482 3087 ntBASIC12.18□□□□□ -0.46
IFNA1P01562 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
IFNA1P01562 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 BNIP3P1-202ENST00000550043 1585 ntBASIC12.18□□□□□ -0.46
IFNA1P01562 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 AC004899.2-201ENST00000622993 3860 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 AC138969.3-201ENST00000546612 1459 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 AC138932.2-201ENST00000548268 1459 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 AC126755.4-201ENST00000549796 1459 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.17□□□□□ -0.46
IFNA1P01562 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 TOB2P1-201ENST00000469761 992 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 AC074051.2-201ENST00000565115 352 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.17□□□□□ -0.46
IFNA1P01562 MIR5100-201ENST00000579544 119 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.17□□□□□ -0.46
IFNA1P01562 AC005363.2-201ENST00000618631 242 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 AC005562.1-201ENST00000583030 3219 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
IFNA1P01562 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.17□□□□□ -0.46
IFNA1P01562 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 AC018442.1-201ENST00000421439 2061 ntBASIC12.17□□□□□ -0.46
IFNA1P01562 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.17□□□□□ -0.46
IFNA1P01562 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
IFNA1P01562 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IFNA1P01562 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
IFNA1P01562 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
IFNA1P01562 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
IFNA1P01562 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms