Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC106760.1-201ENST00000508690 800 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCL13O43927 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.71□□□□□ -0.21
CXCL13O43927 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCL13O43927 RAB43P1-201ENST00000561790 589 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.71□□□□□ -0.21
CXCL13O43927 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.71□□□□□ -0.21
CXCL13O43927 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.71□□□□□ -0.21
CXCL13O43927 AL162274.1-201ENST00000617191 1098 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 AL359258.3-201ENST00000622910 2331 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCL13O43927 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.71□□□□□ -0.22
CXCL13O43927 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 AC013268.4-201ENST00000637413 2228 ntBASIC13.71□□□□□ -0.22
CXCL13O43927 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCL13O43927 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCL13O43927 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CXCL13O43927 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL13O43927 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CXCL13O43927 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 AP002414.2-201ENST00000591780 3365 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 AC005229.1-201ENST00000392885 409 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 AL139094.1-201ENST00000405549 1188 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.7□□□□□ -0.22
CXCL13O43927 AC114812.1-204ENST00000449669 728 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 CROCCP4-201ENST00000457096 498 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.7□□□□□ -0.22
CXCL13O43927 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 HILS1-202ENST00000545329 423 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 AC106886.1-201ENST00000568660 600 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.7□□□□□ -0.22
CXCL13O43927 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL13O43927 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 REXO1L4P-201ENST00000605109 1937 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 MYO15B-237ENST00000642007 4893 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CXCL13O43927 AC022532.1-201ENST00000624563 1728 ntBASIC13.7□□□□□ -0.22
CXCL13O43927 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL13O43927 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 LRRC59-203ENST00000576448 1531 ntBASIC13.69□□□□□ -0.22
CXCL13O43927 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 AC012508.2-201ENST00000567613 1472 ntBASIC13.69□□□□□ -0.22
CXCL13O43927 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms