Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP2AO43633 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP2AO43633 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP2AO43633 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP2AO43633 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP2AO43633 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP2AO43633 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 AC092933.1-201ENST00000393644 945 ntBASIC17.21■□□□□ 0.35
CHMP2AO43633 MIR1909-201ENST00000411312 80 ntBASIC17.21■□□□□ 0.35
CHMP2AO43633 GHSR-202ENST00000427970 912 ntBASIC17.21■□□□□ 0.35
CHMP2AO43633 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP2AO43633 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.21■□□□□ 0.35
CHMP2AO43633 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP2AO43633 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHMP2AO43633 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 AC017083.2-201ENST00000608069 979 ntBASIC17.21■□□□□ 0.35
CHMP2AO43633 AC244669.2-201ENST00000612320 853 ntBASIC17.21■□□□□ 0.35
CHMP2AO43633 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.21■□□□□ 0.35
CHMP2AO43633 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHMP2AO43633 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP2AO43633 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP2AO43633 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP2AO43633 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP2AO43633 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CHMP2AO43633 PDIA3P1-201ENST00000471856 1510 ntBASIC17.21■□□□□ 0.34
CHMP2AO43633 AC091951.1-201ENST00000512854 2465 ntBASIC17.21■□□□□ 0.34
CHMP2AO43633 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP2AO43633 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP2AO43633 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHMP2AO43633 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 ANKRD19P-201ENST00000338192 862 ntBASIC17.2■□□□□ 0.34
CHMP2AO43633 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP2AO43633 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 MIR658-201ENST00000385210 100 ntBASIC17.2■□□□□ 0.34
CHMP2AO43633 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHMP2AO43633 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP2AO43633 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.2■□□□□ 0.34
CHMP2AO43633 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AL008721.1-201ENST00000609964 604 ntBASIC17.2■□□□□ 0.34
CHMP2AO43633 AC145423.3-201ENST00000615987 467 ntBASIC17.2■□□□□ 0.34
CHMP2AO43633 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHMP2AO43633 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms