Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMBIM7P-203ENST00000641617 1718 ntBASIC17.21■□□□□ 0.35
DDX39AO00148 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DDX39AO00148 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.21■□□□□ 0.34
DDX39AO00148 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DDX39AO00148 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DDX39AO00148 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DDX39AO00148 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX39AO00148 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.2■□□□□ 0.34
DDX39AO00148 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 LINC00554-201ENST00000564841 3011 ntBASIC17.2■□□□□ 0.34
DDX39AO00148 REXO1L4P-201ENST00000605109 1937 ntBASIC17.2■□□□□ 0.34
DDX39AO00148 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DDX39AO00148 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.2■□□□□ 0.34
DDX39AO00148 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.2■□□□□ 0.34
DDX39AO00148 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX39AO00148 AL645728.2-202ENST00000641679 227 ntBASIC17.2■□□□□ 0.34
DDX39AO00148 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DDX39AO00148 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.2■□□□□ 0.34
DDX39AO00148 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX39AO00148 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DDX39AO00148 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX39AO00148 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DDX39AO00148 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 PKD1P5-201ENST00000532415 10291 ntBASIC17.19■□□□□ 0.34
DDX39AO00148 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DDX39AO00148 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DDX39AO00148 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX39AO00148 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 AC026954.1-201ENST00000429771 1293 ntBASIC17.19■□□□□ 0.34
DDX39AO00148 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX39AO00148 AC078819.1-201ENST00000547454 765 ntBASIC17.19■□□□□ 0.34
DDX39AO00148 AC012085.1-201ENST00000548270 765 ntBASIC17.19■□□□□ 0.34
DDX39AO00148 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.19■□□□□ 0.34
DDX39AO00148 PRSS30P-206ENST00000641773 873 ntBASIC17.19■□□□□ 0.34
DDX39AO00148 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
DDX39AO00148 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX39AO00148 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
DDX39AO00148 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX39AO00148 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
DDX39AO00148 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
DDX39AO00148 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX39AO00148 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX39AO00148 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms