Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC007541.1-201ENST00000570282 1469 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 KRT18P43-201ENST00000469825 1281 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC036164.1-201ENST00000570544 333 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC138761.1-201ENST00000584393 385 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC138969.3-201ENST00000546612 1459 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC138932.2-201ENST00000548268 1459 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AC126755.4-201ENST00000549796 1459 ntBASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PRAMEF25A6NGN4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 GHSR-202ENST00000427970 912 ntBASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 AC190387.1-201ENST00000551683 408 ntBASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms