Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 AL355306.1-201ENST00000415580 579 ntBASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 KRT18P35-201ENST00000510488 1269 ntBASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.33□□□□□ -0.11
TCRBV3S1A0A5B6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.33□□□□□ -0.11
TCRBV3S1A0A5B6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV3S1A0A5B6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.33□□□□□ -0.11
TCRBV3S1A0A5B6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV3S1A0A5B6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 AL031284.1-201ENST00000419297 478 ntBASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 EMBP1-201ENST00000458200 901 ntBASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 AL773604.1-201ENST00000617417 272 ntBASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 AP3S2-216ENST00000617003 1561 ntBASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TCRBV3S1A0A5B6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV3S1A0A5B6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms