Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 GRAMD4P4-201ENST00000613563 1115 ntBASIC39.18■■■■□ 3.86
BIVM-ERCC5R4GMW8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
BIVM-ERCC5R4GMW8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
BIVM-ERCC5R4GMW8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
BIVM-ERCC5R4GMW8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC39.17■■■■□ 3.86
BIVM-ERCC5R4GMW8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC39.17■■■■□ 3.86
BIVM-ERCC5R4GMW8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
BIVM-ERCC5R4GMW8 AL355001.2-201ENST00000620617 1191 ntBASIC39.16■■■■□ 3.86
BIVM-ERCC5R4GMW8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 AC092803.2-201ENST00000564287 1899 ntBASIC39.15■■■■□ 3.86
BIVM-ERCC5R4GMW8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 AL136967.2-201ENST00000623968 743 ntBASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 PTCHD3P2-201ENST00000424937 1205 ntBASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC39.14■■■■□ 3.86
BIVM-ERCC5R4GMW8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
BIVM-ERCC5R4GMW8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
BIVM-ERCC5R4GMW8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC39.13■■■■□ 3.85
BIVM-ERCC5R4GMW8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
BIVM-ERCC5R4GMW8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC39.12■■■■□ 3.85
BIVM-ERCC5R4GMW8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC39.12■■■■□ 3.85
BIVM-ERCC5R4GMW8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
BIVM-ERCC5R4GMW8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC39.12■■■■□ 3.85
BIVM-ERCC5R4GMW8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC39.12■■■■□ 3.85
BIVM-ERCC5R4GMW8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 DUX4L19-201ENST00000557448 1267 ntBASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 MIR4767-201ENST00000582827 78 ntBASIC39.11■■■■□ 3.85
BIVM-ERCC5R4GMW8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
BIVM-ERCC5R4GMW8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC39.1■■■■□ 3.85
BIVM-ERCC5R4GMW8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
BIVM-ERCC5R4GMW8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
BIVM-ERCC5R4GMW8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
BIVM-ERCC5R4GMW8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC39.1■■■■□ 3.85
BIVM-ERCC5R4GMW8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC39.09■■■■□ 3.85
BIVM-ERCC5R4GMW8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC39.09■■■■□ 3.85
BIVM-ERCC5R4GMW8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC39.09■■■■□ 3.85
BIVM-ERCC5R4GMW8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
BIVM-ERCC5R4GMW8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC39.08■■■■□ 3.85
BIVM-ERCC5R4GMW8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC39.08■■■■□ 3.85
BIVM-ERCC5R4GMW8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
BIVM-ERCC5R4GMW8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC39.08■■■■□ 3.85
BIVM-ERCC5R4GMW8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC39.08■■■■□ 3.85
BIVM-ERCC5R4GMW8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
BIVM-ERCC5R4GMW8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
BIVM-ERCC5R4GMW8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
BIVM-ERCC5R4GMW8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
BIVM-ERCC5R4GMW8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC39.07■■■■□ 3.84
BIVM-ERCC5R4GMW8 SERBP1P1-201ENST00000396021 1160 ntBASIC39.07■■■■□ 3.84
BIVM-ERCC5R4GMW8 AC104564.3-201ENST00000582367 638 ntBASIC39.07■■■■□ 3.84
BIVM-ERCC5R4GMW8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC39.06■■■■□ 3.84
BIVM-ERCC5R4GMW8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
BIVM-ERCC5R4GMW8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC39.06■■■■□ 3.84
BIVM-ERCC5R4GMW8 AC011298.3-201ENST00000615796 283 ntBASIC39.06■■■■□ 3.84
BIVM-ERCC5R4GMW8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC39.06■■■■□ 3.84
BIVM-ERCC5R4GMW8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
BIVM-ERCC5R4GMW8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC39.05■■■■□ 3.84
BIVM-ERCC5R4GMW8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC39.04■■■■□ 3.84
BIVM-ERCC5R4GMW8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
BIVM-ERCC5R4GMW8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
BIVM-ERCC5R4GMW8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
BIVM-ERCC5R4GMW8 AC091305.1-201ENST00000479476 895 ntBASIC39.03■■■■□ 3.84
BIVM-ERCC5R4GMW8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
BIVM-ERCC5R4GMW8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
BIVM-ERCC5R4GMW8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
BIVM-ERCC5R4GMW8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
BIVM-ERCC5R4GMW8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC39.03■■■■□ 3.84
BIVM-ERCC5R4GMW8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 C17orf82-201ENST00000623772 1530 ntBASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC39.02■■■■□ 3.84
BIVM-ERCC5R4GMW8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC39.01■■■■□ 3.84
BIVM-ERCC5R4GMW8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC39.01■■■■□ 3.84
BIVM-ERCC5R4GMW8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC39.01■■■■□ 3.84
BIVM-ERCC5R4GMW8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
BIVM-ERCC5R4GMW8 AC027682.1-201ENST00000562846 899 ntBASIC39■■■■□ 3.83
BIVM-ERCC5R4GMW8 MIR5787-201ENST00000611784 55 ntBASIC39■■■■□ 3.83
BIVM-ERCC5R4GMW8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC39■■■■□ 3.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms