Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCA3PQ9Y6N3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCA3PQ9Y6N3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCA3PQ9Y6N3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCA3PQ9Y6N3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLCA3PQ9Y6N3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCA3PQ9Y6N3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCA3PQ9Y6N3 AP003733.4-201ENST00000623785 1697 ntBASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCA3PQ9Y6N3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCA3PQ9Y6N3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCA3PQ9Y6N3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 MIR4787-201ENST00000607364 84 ntBASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 AC021242.3-201ENST00000607598 1377 ntBASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 AF131216.4-201ENST00000638924 1588 ntBASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCA3PQ9Y6N3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 AC138932.3-201ENST00000567634 1902 ntBASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCA3PQ9Y6N3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCA3PQ9Y6N3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCA3PQ9Y6N3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCA3PQ9Y6N3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLCA3PQ9Y6N3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLCA3PQ9Y6N3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.64■■□□□ 1.05
CLCA3PQ9Y6N3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 GUSBP5-201ENST00000418136 578 ntBASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCA3PQ9Y6N3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms