Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.96■□□□□ 0.15
SPCS1Q9Y6A9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SPCS1Q9Y6A9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SPCS1Q9Y6A9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 AC138932.1-201ENST00000534164 6830 ntBASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPCS1Q9Y6A9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SPCS1Q9Y6A9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SPCS1Q9Y6A9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPCS1Q9Y6A9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SPCS1Q9Y6A9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPCS1Q9Y6A9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPCS1Q9Y6A9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SPCS1Q9Y6A9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 GUSBP5-202ENST00000510805 1989 ntBASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPCS1Q9Y6A9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPCS1Q9Y6A9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
SPCS1Q9Y6A9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SPCS1Q9Y6A9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPCS1Q9Y6A9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms