Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HCFC2Q9Y5Z7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HCFC2Q9Y5Z7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.45■■□□□ 1.5
HCFC2Q9Y5Z7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HCFC2Q9Y5Z7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.45■■□□□ 1.5
HCFC2Q9Y5Z7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HCFC2Q9Y5Z7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 MIR4767-201ENST00000582827 78 ntBASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 AC092171.4-201ENST00000609130 632 ntBASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
HCFC2Q9Y5Z7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 MIR6821-201ENST00000617625 74 ntBASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
HCFC2Q9Y5Z7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
HCFC2Q9Y5Z7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HCFC2Q9Y5Z7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 AC097381.1-201ENST00000429019 1296 ntBASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 AC010501.1-201ENST00000606270 1962 ntBASIC24.4■■□□□ 1.5
HCFC2Q9Y5Z7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HCFC2Q9Y5Z7 SERBP1P1-201ENST00000396021 1160 ntBASIC24.39■■□□□ 1.49
HCFC2Q9Y5Z7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HCFC2Q9Y5Z7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.39■■□□□ 1.49
HCFC2Q9Y5Z7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HCFC2Q9Y5Z7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.39■■□□□ 1.49
HCFC2Q9Y5Z7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HCFC2Q9Y5Z7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 RASA4CP-201ENST00000424092 1398 ntBASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HCFC2Q9Y5Z7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.37■■□□□ 1.49
HCFC2Q9Y5Z7 CA15P2-201ENST00000611168 834 ntBASIC24.37■■□□□ 1.49
HCFC2Q9Y5Z7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
HCFC2Q9Y5Z7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HCFC2Q9Y5Z7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.37■■□□□ 1.49
HCFC2Q9Y5Z7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.37■■□□□ 1.49
HCFC2Q9Y5Z7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 AC099791.2-201ENST00000605725 427 ntBASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HCFC2Q9Y5Z7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HCFC2Q9Y5Z7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.35■■□□□ 1.49
HCFC2Q9Y5Z7 AC087623.3-201ENST00000607047 1098 ntBASIC24.35■■□□□ 1.49
HCFC2Q9Y5Z7 AC131274.2-201ENST00000580697 1507 ntBASIC24.35■■□□□ 1.49
HCFC2Q9Y5Z7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HCFC2Q9Y5Z7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
HCFC2Q9Y5Z7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HCFC2Q9Y5Z7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.33■■□□□ 1.49
HCFC2Q9Y5Z7 AC027682.1-201ENST00000562846 899 ntBASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms