Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC004987.1-201ENST00000428627 508 ntBASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 ATP5G2P3-201ENST00000429083 425 ntBASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA9Q9Y5H5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 LONRF2P2-201ENST00000439212 571 ntBASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 AC079834.2-201ENST00000609776 1949 ntBASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA9Q9Y5H5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDHA9Q9Y5H5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA9Q9Y5H5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA9Q9Y5H5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHA9Q9Y5H5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA9Q9Y5H5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA9Q9Y5H5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA9Q9Y5H5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHA9Q9Y5H5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA9Q9Y5H5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHA9Q9Y5H5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA9Q9Y5H5 AC139795.1-202ENST00000500444 432 ntBASIC22.18■■□□□ 1.14
PCDHA9Q9Y5H5 HLA-L-211ENST00000482052 1765 ntBASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 TSPY13P-201ENST00000338964 914 ntBASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 AL592295.1-201ENST00000400984 884 ntBASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA9Q9Y5H5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 AC012354.3-201ENST00000623734 483 ntBASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA9Q9Y5H5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PCDHA9Q9Y5H5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA9Q9Y5H5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA9Q9Y5H5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA9Q9Y5H5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA9Q9Y5H5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHA9Q9Y5H5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHA9Q9Y5H5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHA9Q9Y5H5 AC019171.1-201ENST00000601251 1056 ntBASIC22.14■■□□□ 1.13
PCDHA9Q9Y5H5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PCDHA9Q9Y5H5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 C9orf163-202ENST00000624034 2573 ntBASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA9Q9Y5H5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms