Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MIR4787-201ENST00000607364 84 ntBASIC23.37■■□□□ 1.33
PCDHGC4Q9Y5F7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGC4Q9Y5F7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGC4Q9Y5F7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDHGC4Q9Y5F7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGC4Q9Y5F7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
PCDHGC4Q9Y5F7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHGC4Q9Y5F7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC4Q9Y5F7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC4Q9Y5F7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC4Q9Y5F7 LINC01124-201ENST00000409786 2117 ntBASIC23.34■■□□□ 1.33
PCDHGC4Q9Y5F7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PCDHGC4Q9Y5F7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC4Q9Y5F7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC4Q9Y5F7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC4Q9Y5F7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC4Q9Y5F7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC4Q9Y5F7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.33■■□□□ 1.32
PCDHGC4Q9Y5F7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 AC131274.2-201ENST00000580697 1507 ntBASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHGC4Q9Y5F7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 GUSBP5-201ENST00000418136 578 ntBASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 AC092028.1-203ENST00000608262 953 ntBASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHGC4Q9Y5F7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDHGC4Q9Y5F7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGC4Q9Y5F7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC4Q9Y5F7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC4Q9Y5F7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGC4Q9Y5F7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGC4Q9Y5F7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC4Q9Y5F7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 AL022069.1-201ENST00000568025 1636 ntBASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 TSPY9P-201ENST00000440215 945 ntBASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 TSPY11P-201ENST00000442607 1045 ntBASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGC4Q9Y5F7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms