Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MKKSQ9NPJ1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.86■■□□□ 1.09
MKKSQ9NPJ1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.86■■□□□ 1.09
MKKSQ9NPJ1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.86■■□□□ 1.09
MKKSQ9NPJ1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.86■■□□□ 1.09
MKKSQ9NPJ1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.86■■□□□ 1.09
MKKSQ9NPJ1 AC135731.1-201ENST00000569415 2548 ntBASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MKKSQ9NPJ1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 SNX5-217ENST00000606557 1087 ntBASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
MKKSQ9NPJ1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MKKSQ9NPJ1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.83■■□□□ 1.09
MKKSQ9NPJ1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MKKSQ9NPJ1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
MKKSQ9NPJ1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.83■■□□□ 1.09
MKKSQ9NPJ1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MKKSQ9NPJ1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MKKSQ9NPJ1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.82■■□□□ 1.08
MKKSQ9NPJ1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MKKSQ9NPJ1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.82■■□□□ 1.08
MKKSQ9NPJ1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
MKKSQ9NPJ1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MKKSQ9NPJ1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.81■■□□□ 1.08
MKKSQ9NPJ1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 MIR6724-1-201ENST00000616420 92 ntBASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 MIR6724-2-201ENST00000616483 92 ntBASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 MIR6724-4-201ENST00000617390 92 ntBASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 MIR6724-3-201ENST00000622482 92 ntBASIC21.8■■□□□ 1.08
MKKSQ9NPJ1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 AC004448.1-201ENST00000458332 883 ntBASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 MIR6722-201ENST00000617286 78 ntBASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 AC022211.4-201ENST00000625094 2161 ntBASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKKSQ9NPJ1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MKKSQ9NPJ1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 AC142381.3-201ENST00000568208 1670 ntBASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKKSQ9NPJ1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
MKKSQ9NPJ1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MKKSQ9NPJ1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.76■■□□□ 1.07
MKKSQ9NPJ1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MKKSQ9NPJ1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MKKSQ9NPJ1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms